Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL671277.1-201ENST00000429656 993 ntBASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 AC104692.2-201ENST00000603054 253 ntBASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.43■□□□□ 0.06
NUDCD3Q8IVD9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 AC005840.4-201ENST00000541242 2494 ntBASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 MRPL3P1-201ENST00000400109 1033 ntBASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 AC007967.2-201ENST00000432613 625 ntBASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 FAAHP1-202ENST00000446499 1238 ntBASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 AL513190.1-201ENST00000621254 727 ntBASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NUDCD3Q8IVD9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 BX640514.1-201ENST00000583223 1918 ntBASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.41■□□□□ 0.06
NUDCD3Q8IVD9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms