Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 CNN2P8-201ENST00000421872 913 ntBASIC16.43■□□□□ 0.22
RNF135Q8IUD6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 AC004898.1-201ENST00000451057 766 ntBASIC16.43■□□□□ 0.22
RNF135Q8IUD6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 MIR5572-201ENST00000583188 137 ntBASIC16.43■□□□□ 0.22
RNF135Q8IUD6 MIR4321-201ENST00000592276 80 ntBASIC16.43■□□□□ 0.22
RNF135Q8IUD6 SPCS2P2-201ENST00000603270 608 ntBASIC16.43■□□□□ 0.22
RNF135Q8IUD6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 AC126755.1-201ENST00000525846 6405 ntBASIC16.43■□□□□ 0.22
RNF135Q8IUD6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AL162727.3-201ENST00000635661 2787 ntBASIC16.42■□□□□ 0.22
RNF135Q8IUD6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 RN7SL769P-201ENST00000469386 295 ntBASIC16.42■□□□□ 0.22
RNF135Q8IUD6 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 HIST2H2BC-201ENST00000498492 580 ntBASIC16.42■□□□□ 0.22
RNF135Q8IUD6 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 RN7SL371P-201ENST00000578099 267 ntBASIC16.42■□□□□ 0.22
RNF135Q8IUD6 GNRHR2-203ENST00000581100 1187 ntBASIC16.42■□□□□ 0.22
RNF135Q8IUD6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AC005695.3-201ENST00000614522 232 ntBASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AC005252.2-201ENST00000624630 1141 ntBASIC16.42■□□□□ 0.22
RNF135Q8IUD6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 KRT8P19-201ENST00000551916 1455 ntBASIC16.42■□□□□ 0.22
RNF135Q8IUD6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF135Q8IUD6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms