Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 AC136621.1-201ENST00000624017 2304 ntBASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM4Q86VH4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 SSR4P1-203ENST00000599569 2260 ntBASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 PKD1P5-201ENST00000532415 10291 ntBASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 USP32P1-208ENST00000506594 1164 ntBASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 NORAD-201ENST00000565493 5339 ntBASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 AC093525.8-201ENST00000624099 1342 ntBASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
LRRTM4Q86VH4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AL596257.1-201ENST00000641463 2694 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 BAATP1-201ENST00000412284 1225 ntBASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.13■□□□□ 0.01
LRRTM4Q86VH4 U91328.1-201ENST00000437528 223 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms