Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 ANKRD19P-201ENST00000338192 862 ntBASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 AL355864.2-201ENST00000447420 863 ntBASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 BCRP2-202ENST00000447763 634 ntBASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 BCRP6-201ENST00000510112 632 ntBASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 BCRP7-201ENST00000511549 544 ntBASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 AL138799.1-201ENST00000448213 1675 ntBASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
H3F3CQ6NXT2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 PDIA3P1-201ENST00000471856 1510 ntBASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 KRT223P-202ENST00000449164 1292 ntBASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 AC133552.6-201ENST00000613406 534 ntBASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 AP005019.2-201ENST00000615104 511 ntBASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
H3F3CQ6NXT2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 MSTO2P-201ENST00000314835 1709 ntBASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3F3CQ6NXT2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms