Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AL645728.2-202ENST00000641679 227 ntBASIC14.74□□□□□ -0.05
RIF1Q5UIP0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AL133373.2-201ENST00000623187 2828 ntBASIC14.74□□□□□ -0.05
RIF1Q5UIP0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AC092299.1-201ENST00000632679 757 ntBASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AC008764.6-201ENST00000595909 2069 ntBASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.74□□□□□ -0.05
RIF1Q5UIP0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 AC010900.1-201ENST00000449849 1296 ntBASIC14.73□□□□□ -0.05
RIF1Q5UIP0 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 MIR4313-201ENST00000580760 101 ntBASIC14.73□□□□□ -0.05
RIF1Q5UIP0 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 DUTP3-201ENST00000450025 415 ntBASIC14.73□□□□□ -0.05
RIF1Q5UIP0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 AC087392.5-201ENST00000612517 489 ntBASIC14.73□□□□□ -0.05
RIF1Q5UIP0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.73□□□□□ -0.05
RIF1Q5UIP0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 HLA-DMA-203ENST00000395305 777 ntBASIC14.72□□□□□ -0.05
RIF1Q5UIP0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 AC002472.3-201ENST00000640124 621 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms