Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 AC007967.4-201ENST00000614700 386 ntBASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATPAF1Q5TC12 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 AP001282.1-201ENST00000531301 1499 ntBASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 AL035456.1-201ENST00000456064 1369 ntBASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 AL139010.1-201ENST00000454878 894 ntBASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 AC109322.1-201ENST00000524499 1264 ntBASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATPAF1Q5TC12 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 KRT18P28-201ENST00000453838 1332 ntBASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 AC004449.1-201ENST00000564240 433 ntBASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 AJ011931.1-201ENST00000618749 2492 ntBASIC13.49□□□□□ -0.25
ATPAF1Q5TC12 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms