Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.46□□□□□ -0.1
RFX4Q33E94 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFX4Q33E94 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFX4Q33E94 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.46□□□□□ -0.1
RFX4Q33E94 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFX4Q33E94 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
RFX4Q33E94 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.46□□□□□ -0.1
RFX4Q33E94 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RFX4Q33E94 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
RFX4Q33E94 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.45□□□□□ -0.1
RFX4Q33E94 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.45□□□□□ -0.1
RFX4Q33E94 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.45□□□□□ -0.1
RFX4Q33E94 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.45□□□□□ -0.1
RFX4Q33E94 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.45□□□□□ -0.1
RFX4Q33E94 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
RFX4Q33E94 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.45□□□□□ -0.1
RFX4Q33E94 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RFX4Q33E94 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.45□□□□□ -0.1
RFX4Q33E94 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.45□□□□□ -0.1
RFX4Q33E94 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.45□□□□□ -0.1
RFX4Q33E94 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.45□□□□□ -0.1
RFX4Q33E94 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.45□□□□□ -0.1
RFX4Q33E94 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.45□□□□□ -0.1
RFX4Q33E94 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.45□□□□□ -0.1
RFX4Q33E94 AL359881.3-201ENST00000602640 1721 ntBASIC14.45□□□□□ -0.1
RFX4Q33E94 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.45□□□□□ -0.1
RFX4Q33E94 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFX4Q33E94 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.45□□□□□ -0.1
RFX4Q33E94 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RFX4Q33E94 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.45□□□□□ -0.1
RFX4Q33E94 AC027601.5-201ENST00000624065 2482 ntBASIC14.44□□□□□ -0.1
RFX4Q33E94 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RFX4Q33E94 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RFX4Q33E94 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
RFX4Q33E94 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 PHKG1P2-201ENST00000457537 863 ntBASIC14.44□□□□□ -0.1
RFX4Q33E94 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.44□□□□□ -0.1
RFX4Q33E94 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.44□□□□□ -0.1
RFX4Q33E94 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.44□□□□□ -0.1
RFX4Q33E94 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.44□□□□□ -0.1
RFX4Q33E94 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.44□□□□□ -0.1
RFX4Q33E94 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.44□□□□□ -0.1
RFX4Q33E94 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.44□□□□□ -0.1
RFX4Q33E94 AL513190.1-201ENST00000621254 727 ntBASIC14.44□□□□□ -0.1
RFX4Q33E94 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 FOXO1B-201ENST00000504678 1527 ntBASIC14.44□□□□□ -0.1
RFX4Q33E94 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.44□□□□□ -0.1
RFX4Q33E94 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RFX4Q33E94 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.44□□□□□ -0.1
RFX4Q33E94 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFX4Q33E94 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 AKAP8P1-201ENST00000434743 1349 ntBASIC14.43□□□□□ -0.1
RFX4Q33E94 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RFX4Q33E94 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFX4Q33E94 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.43□□□□□ -0.1
RFX4Q33E94 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.43□□□□□ -0.1
RFX4Q33E94 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.43□□□□□ -0.1
RFX4Q33E94 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms