Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 PHKG1P2-201ENST00000457537 863 ntBASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 EEF1DP1-201ENST00000585891 896 ntBASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CTC1Q2NKJ3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 AC120057.1-201ENST00000483947 663 ntBASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 AP005019.2-201ENST00000615104 511 ntBASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 AC138627.1-207ENST00000641560 1006 ntBASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 AP005117.1-202ENST00000581724 1908 ntBASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 AL121723.1-201ENST00000445194 1519 ntBASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTC1Q2NKJ3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 CD8B2-202ENST00000417670 633 ntBASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 KRT18P43-201ENST00000469825 1281 ntBASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 AL096828.3-201ENST00000615354 462 ntBASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 AC145423.3-201ENST00000615987 467 ntBASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms