Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.43□□□□□ -0.1
CD47Q08722 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.43□□□□□ -0.1
CD47Q08722 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CD47Q08722 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.43□□□□□ -0.1
CD47Q08722 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
CD47Q08722 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.43□□□□□ -0.1
CD47Q08722 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.43□□□□□ -0.1
CD47Q08722 SPDYE11-202ENST00000450699 704 ntBASIC14.43□□□□□ -0.1
CD47Q08722 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.43□□□□□ -0.1
CD47Q08722 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CD47Q08722 AL138918.1-201ENST00000568306 659 ntBASIC14.43□□□□□ -0.1
CD47Q08722 SPDYE9P-201ENST00000570642 692 ntBASIC14.43□□□□□ -0.1
CD47Q08722 SPDYE10P-202ENST00000612005 668 ntBASIC14.43□□□□□ -0.1
CD47Q08722 SPDYE8P-202ENST00000612377 668 ntBASIC14.43□□□□□ -0.1
CD47Q08722 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.43□□□□□ -0.1
CD47Q08722 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CD47Q08722 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 REXO1L1P-202ENST00000608646 1974 ntBASIC14.43□□□□□ -0.1
CD47Q08722 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CD47Q08722 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.43□□□□□ -0.1
CD47Q08722 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CD47Q08722 AC005252.3-201ENST00000623855 2258 ntBASIC14.43□□□□□ -0.1
CD47Q08722 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD47Q08722 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.42□□□□□ -0.1
CD47Q08722 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.42□□□□□ -0.1
CD47Q08722 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.42□□□□□ -0.1
CD47Q08722 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.42□□□□□ -0.1
CD47Q08722 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.42□□□□□ -0.1
CD47Q08722 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CD47Q08722 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.42□□□□□ -0.1
CD47Q08722 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.42□□□□□ -0.1
CD47Q08722 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.42□□□□□ -0.1
CD47Q08722 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.42□□□□□ -0.1
CD47Q08722 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CD47Q08722 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.42□□□□□ -0.1
CD47Q08722 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.42□□□□□ -0.1
CD47Q08722 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 AC027307.2-201ENST00000591252 911 ntBASIC14.42□□□□□ -0.1
CD47Q08722 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CD47Q08722 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.42□□□□□ -0.1
CD47Q08722 AC092902.6-201ENST00000641783 218 ntBASIC14.42□□□□□ -0.1
CD47Q08722 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.42□□□□□ -0.1
CD47Q08722 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CD47Q08722 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.42□□□□□ -0.1
CD47Q08722 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CD47Q08722 BNIP3P1-202ENST00000550043 1585 ntBASIC14.42□□□□□ -0.1
CD47Q08722 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD47Q08722 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD47Q08722 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms