Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCS1Q01581 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HMGCS1Q01581 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 METTL21AP1-201ENST00000438852 635 ntBASIC14.94□□□□□ -0.02
HMGCS1Q01581 RPL13P2-201ENST00000440687 659 ntBASIC14.94□□□□□ -0.02
HMGCS1Q01581 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HMGCS1Q01581 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HMGCS1Q01581 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 TUBB3P1-201ENST00000405796 1332 ntBASIC14.93□□□□□ -0.02
HMGCS1Q01581 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 RN7SL618P-201ENST00000477850 296 ntBASIC14.93□□□□□ -0.02
HMGCS1Q01581 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 AC010336.2-201ENST00000564226 506 ntBASIC14.93□□□□□ -0.02
HMGCS1Q01581 AC004449.1-201ENST00000564240 433 ntBASIC14.93□□□□□ -0.02
HMGCS1Q01581 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms