Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 AC026470.1-201ENST00000478038 846 ntBASIC14.1□□□□□ -0.15
CACNA1BQ00975 AC008723.1-201ENST00000506922 207 ntBASIC14.1□□□□□ -0.15
CACNA1BQ00975 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 AC008805.1-201ENST00000590892 364 ntBASIC14.1□□□□□ -0.15
CACNA1BQ00975 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.1□□□□□ -0.15
CACNA1BQ00975 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CACNA1BQ00975 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 AC148477.4-201ENST00000613430 1793 ntBASIC14.09□□□□□ -0.15
CACNA1BQ00975 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 RN7SL602P-201ENST00000578326 324 ntBASIC14.09□□□□□ -0.15
CACNA1BQ00975 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 RN7SL718P-201ENST00000581254 303 ntBASIC14.09□□□□□ -0.15
CACNA1BQ00975 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 MIR557-201ENST00000385239 98 ntBASIC14.09□□□□□ -0.15
CACNA1BQ00975 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 AC063952.3-201ENST00000467756 308 ntBASIC14.09□□□□□ -0.15
CACNA1BQ00975 AC009779.1-201ENST00000551138 283 ntBASIC14.09□□□□□ -0.15
CACNA1BQ00975 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 MIR6746-201ENST00000620971 63 ntBASIC14.09□□□□□ -0.15
CACNA1BQ00975 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 AC015909.3-201ENST00000572855 1794 ntBASIC14.09□□□□□ -0.15
CACNA1BQ00975 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.09□□□□□ -0.15
CACNA1BQ00975 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CACNA1BQ00975 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CACNA1BQ00975 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.08□□□□□ -0.16
CACNA1BQ00975 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.08□□□□□ -0.16
CACNA1BQ00975 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms