Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
AP1S1P61966 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.52■□□□□ 0.08
AP1S1P61966 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S1P61966 TTTY23B-201ENST00000442790 549 ntBASIC15.52■□□□□ 0.08
AP1S1P61966 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP1S1P61966 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.52■□□□□ 0.08
AP1S1P61966 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.52■□□□□ 0.08
AP1S1P61966 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
AP1S1P61966 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.52■□□□□ 0.08
AP1S1P61966 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
AP1S1P61966 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S1P61966 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S1P61966 AP005019.2-201ENST00000615104 511 ntBASIC15.52■□□□□ 0.08
AP1S1P61966 IGHV3-72-202ENST00000621503 303 ntBASIC15.52■□□□□ 0.08
AP1S1P61966 RPSAP52-203ENST00000622976 1023 ntBASIC15.52■□□□□ 0.08
AP1S1P61966 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.52■□□□□ 0.08
AP1S1P61966 PRSS30P-206ENST00000641773 873 ntBASIC15.52■□□□□ 0.08
AP1S1P61966 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S1P61966 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S1P61966 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
AP1S1P61966 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
AP1S1P61966 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S1P61966 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S1P61966 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S1P61966 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
AP1S1P61966 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S1P61966 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
AP1S1P61966 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
AP1S1P61966 AL109954.1-202ENST00000564051 2148 ntBASIC15.52■□□□□ 0.07
AP1S1P61966 AL162727.3-201ENST00000635661 2787 ntBASIC15.52■□□□□ 0.07
AP1S1P61966 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S1P61966 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
AP1S1P61966 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP1S1P61966 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.52■□□□□ 0.07
AP1S1P61966 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.51■□□□□ 0.07
AP1S1P61966 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.51■□□□□ 0.07
AP1S1P61966 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
AP1S1P61966 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
AP1S1P61966 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
AP1S1P61966 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
AP1S1P61966 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
AP1S1P61966 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.51■□□□□ 0.07
AP1S1P61966 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.51■□□□□ 0.07
AP1S1P61966 AC005034.1-201ENST00000426657 489 ntBASIC15.51■□□□□ 0.07
AP1S1P61966 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.51■□□□□ 0.07
AP1S1P61966 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.51■□□□□ 0.07
AP1S1P61966 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 AC022137.2-201ENST00000503482 481 ntBASIC15.51■□□□□ 0.07
AP1S1P61966 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.51■□□□□ 0.07
AP1S1P61966 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 PTP4A1P2-201ENST00000546033 454 ntBASIC15.51■□□□□ 0.07
AP1S1P61966 AC132938.2-201ENST00000579188 680 ntBASIC15.51■□□□□ 0.07
AP1S1P61966 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.51■□□□□ 0.07
AP1S1P61966 AL591163.1-201ENST00000641757 987 ntBASIC15.51■□□□□ 0.07
AP1S1P61966 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
AP1S1P61966 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S1P61966 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S1P61966 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S1P61966 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AP1S1P61966 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S1P61966 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S1P61966 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S1P61966 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
AP1S1P61966 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S1P61966 AC073347.1-201ENST00000421633 2643 ntBASIC15.5■□□□□ 0.07
AP1S1P61966 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.5■□□□□ 0.07
AP1S1P61966 AL158070.2-201ENST00000623713 1621 ntBASIC15.5■□□□□ 0.07
AP1S1P61966 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S1P61966 MROH4P-201ENST00000431302 1578 ntBASIC15.5■□□□□ 0.07
AP1S1P61966 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
AP1S1P61966 AC138035.3-201ENST00000622706 2791 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms