Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.5□□□□□ -0.57
CMC4P56277 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.5□□□□□ -0.57
CMC4P56277 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.5□□□□□ -0.57
CMC4P56277 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.5□□□□□ -0.57
CMC4P56277 KRT17P7-201ENST00000451704 1104 ntBASIC11.5□□□□□ -0.57
CMC4P56277 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 ELK1P1-201ENST00000485699 580 ntBASIC11.5□□□□□ -0.57
CMC4P56277 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.5□□□□□ -0.57
CMC4P56277 GAPDHP40-201ENST00000505218 1006 ntBASIC11.5□□□□□ -0.57
CMC4P56277 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.5□□□□□ -0.57
CMC4P56277 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.5□□□□□ -0.57
CMC4P56277 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.5□□□□□ -0.57
CMC4P56277 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.5□□□□□ -0.57
CMC4P56277 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
CMC4P56277 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.5□□□□□ -0.57
CMC4P56277 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 AP005019.2-201ENST00000615104 511 ntBASIC11.5□□□□□ -0.57
CMC4P56277 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 CU634019.7-201ENST00000624153 1185 ntBASIC11.5□□□□□ -0.57
CMC4P56277 FP236241.2-201ENST00000624906 1185 ntBASIC11.5□□□□□ -0.57
CMC4P56277 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CMC4P56277 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 AC090616.6-203ENST00000579186 1945 ntBASIC11.5□□□□□ -0.57
CMC4P56277 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 AC012508.2-201ENST00000567613 1472 ntBASIC11.5□□□□□ -0.57
CMC4P56277 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CMC4P56277 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.5□□□□□ -0.57
CMC4P56277 AC092127.1-201ENST00000567093 3455 ntBASIC11.5□□□□□ -0.57
CMC4P56277 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.49□□□□□ -0.57
CMC4P56277 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
CMC4P56277 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.49□□□□□ -0.57
CMC4P56277 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
CMC4P56277 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.49□□□□□ -0.57
CMC4P56277 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.49□□□□□ -0.57
CMC4P56277 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 GHSR-202ENST00000427970 912 ntBASIC11.49□□□□□ -0.57
CMC4P56277 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.49□□□□□ -0.57
CMC4P56277 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 AC007389.4-201ENST00000454674 793 ntBASIC11.49□□□□□ -0.57
CMC4P56277 RN7SL692P-201ENST00000464677 288 ntBASIC11.49□□□□□ -0.57
CMC4P56277 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.49□□□□□ -0.57
CMC4P56277 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.49□□□□□ -0.57
CMC4P56277 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms