Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
GFRA1P56159 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 AL138709.1-201ENST00000614840 1693 ntBASIC13.79□□□□□ -0.2
GFRA1P56159 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.79□□□□□ -0.2
GFRA1P56159 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
GFRA1P56159 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.79□□□□□ -0.2
GFRA1P56159 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
GFRA1P56159 KLF2P4-201ENST00000451959 1225 ntBASIC13.79□□□□□ -0.2
GFRA1P56159 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 AC104989.1-201ENST00000519711 778 ntBASIC13.79□□□□□ -0.2
GFRA1P56159 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.79□□□□□ -0.2
GFRA1P56159 AP005482.1-201ENST00000563722 1273 ntBASIC13.79□□□□□ -0.2
GFRA1P56159 AC025279.2-201ENST00000569730 653 ntBASIC13.79□□□□□ -0.2
GFRA1P56159 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
GFRA1P56159 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.79□□□□□ -0.2
GFRA1P56159 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GFRA1P56159 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.79□□□□□ -0.2
GFRA1P56159 C18orf15-201ENST00000623680 2534 ntBASIC13.79□□□□□ -0.2
GFRA1P56159 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GFRA1P56159 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.78□□□□□ -0.2
GFRA1P56159 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
GFRA1P56159 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.78□□□□□ -0.2
GFRA1P56159 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.78□□□□□ -0.2
GFRA1P56159 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
GFRA1P56159 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.78□□□□□ -0.2
GFRA1P56159 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
GFRA1P56159 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.78□□□□□ -0.2
GFRA1P56159 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.78□□□□□ -0.2
GFRA1P56159 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
GFRA1P56159 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.78□□□□□ -0.2
GFRA1P56159 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
GFRA1P56159 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
GFRA1P56159 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
GFRA1P56159 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
GFRA1P56159 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
GFRA1P56159 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.78□□□□□ -0.2
GFRA1P56159 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.78□□□□□ -0.2
GFRA1P56159 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
GFRA1P56159 C2orf27AP3-201ENST00000434123 579 ntBASIC13.78□□□□□ -0.2
GFRA1P56159 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms