Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH11P55287 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CDH11P55287 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CDH11P55287 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 MIR346-201ENST00000362234 95 ntBASIC14.25□□□□□ -0.13
CDH11P55287 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH11P55287 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.25□□□□□ -0.13
CDH11P55287 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.25□□□□□ -0.13
CDH11P55287 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH11P55287 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH11P55287 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.25□□□□□ -0.13
CDH11P55287 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH11P55287 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH11P55287 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH11P55287 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
CDH11P55287 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CDH11P55287 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 AC067750.1-201ENST00000608826 6545 ntBASIC14.24□□□□□ -0.13
CDH11P55287 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH11P55287 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH11P55287 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH11P55287 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 TREML5P-201ENST00000421694 576 ntBASIC14.24□□□□□ -0.13
CDH11P55287 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH11P55287 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH11P55287 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CDH11P55287 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 INGX-202ENST00000489074 768 ntBASIC14.24□□□□□ -0.13
CDH11P55287 AC098859.1-201ENST00000502915 1238 ntBASIC14.24□□□□□ -0.13
CDH11P55287 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH11P55287 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.24□□□□□ -0.13
CDH11P55287 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.24□□□□□ -0.13
CDH11P55287 AC140878.1-201ENST00000565277 250 ntBASIC14.24□□□□□ -0.13
CDH11P55287 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH11P55287 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.24□□□□□ -0.13
CDH11P55287 AL390955.2-201ENST00000603032 514 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms