Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF140P52738 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF140P52738 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF140P52738 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ZNF140P52738 C1QBPP1-201ENST00000400117 770 ntBASIC15.34■□□□□ 0.05
ZNF140P52738 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF140P52738 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF140P52738 AL359711.2-201ENST00000563105 872 ntBASIC15.34■□□□□ 0.05
ZNF140P52738 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.34■□□□□ 0.05
ZNF140P52738 WASH4P-201ENST00000564273 1246 ntBASIC15.34■□□□□ 0.05
ZNF140P52738 AC008494.3-201ENST00000606615 944 ntBASIC15.34■□□□□ 0.05
ZNF140P52738 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ZNF140P52738 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ZNF140P52738 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZNF140P52738 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ZNF140P52738 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
ZNF140P52738 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF140P52738 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF140P52738 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
ZNF140P52738 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
ZNF140P52738 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF140P52738 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF140P52738 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
ZNF140P52738 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF140P52738 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF140P52738 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF140P52738 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF140P52738 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.33■□□□□ 0.05
ZNF140P52738 AJ011931.1-201ENST00000618749 2492 ntBASIC15.33■□□□□ 0.04
ZNF140P52738 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF140P52738 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF140P52738 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
ZNF140P52738 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF140P52738 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF140P52738 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF140P52738 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.33■□□□□ 0.04
ZNF140P52738 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF140P52738 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF140P52738 AC140912.1-201ENST00000577171 1054 ntBASIC15.33■□□□□ 0.04
ZNF140P52738 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ZNF140P52738 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 AL360270.3-201ENST00000609118 1348 ntBASIC15.33■□□□□ 0.04
ZNF140P52738 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ZNF140P52738 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF140P52738 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.33■□□□□ 0.04
ZNF140P52738 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF140P52738 KRT8P22-201ENST00000562317 1415 ntBASIC15.33■□□□□ 0.04
ZNF140P52738 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF140P52738 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF140P52738 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF140P52738 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF140P52738 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF140P52738 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ZNF140P52738 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF140P52738 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 AL158070.2-201ENST00000623713 1621 ntBASIC15.32■□□□□ 0.04
ZNF140P52738 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF140P52738 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF140P52738 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF140P52738 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF140P52738 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF140P52738 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF140P52738 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF140P52738 HLA-K-203ENST00000430151 1046 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms