Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 AC132938.4-201ENST00000623835 848 ntBASIC14.58□□□□□ -0.08
GABRA4P48169 RHOXF1P1-202ENST00000635473 501 ntBASIC14.58□□□□□ -0.08
GABRA4P48169 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.58□□□□□ -0.08
GABRA4P48169 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.58□□□□□ -0.08
GABRA4P48169 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.58□□□□□ -0.08
GABRA4P48169 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.58□□□□□ -0.08
GABRA4P48169 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GABRA4P48169 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GABRA4P48169 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GABRA4P48169 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.57□□□□□ -0.08
GABRA4P48169 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 AC006001.1-201ENST00000325130 474 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.57□□□□□ -0.08
GABRA4P48169 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
GABRA4P48169 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.57□□□□□ -0.08
GABRA4P48169 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.57□□□□□ -0.08
GABRA4P48169 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.57□□□□□ -0.08
GABRA4P48169 FAM197Y7-201ENST00000432892 766 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 C2orf27AP3-201ENST00000434123 579 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 CSF2RBP1-201ENST00000447905 391 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.57□□□□□ -0.08
GABRA4P48169 AC078819.1-201ENST00000547454 765 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 AC012085.1-201ENST00000548270 765 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.57□□□□□ -0.08
GABRA4P48169 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 AL354718.3-201ENST00000616414 581 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 CR382287.1-201ENST00000623954 586 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.57□□□□□ -0.08
GABRA4P48169 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
GABRA4P48169 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.57□□□□□ -0.08
GABRA4P48169 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GABRA4P48169 SSR4P1-203ENST00000599569 2260 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GABRA4P48169 AC136621.1-201ENST00000624017 2304 ntBASIC14.57□□□□□ -0.08
GABRA4P48169 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GABRA4P48169 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.56□□□□□ -0.08
GABRA4P48169 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
GABRA4P48169 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
GABRA4P48169 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.56□□□□□ -0.08
GABRA4P48169 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 TMBIM7P-203ENST00000641617 1718 ntBASIC14.56□□□□□ -0.08
GABRA4P48169 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GABRA4P48169 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms