Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP13P45452 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP13P45452 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MMP13P45452 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MMP13P45452 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MMP13P45452 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP13P45452 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP13P45452 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP13P45452 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MMP13P45452 AC140479.7-201ENST00000636301 2332 ntBASIC16.11■□□□□ 0.17
MMP13P45452 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.11■□□□□ 0.17
MMP13P45452 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MMP13P45452 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
MMP13P45452 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP13P45452 BASP1P1-201ENST00000430708 665 ntBASIC16.11■□□□□ 0.17
MMP13P45452 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP13P45452 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP13P45452 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP13P45452 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP13P45452 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP13P45452 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.11■□□□□ 0.17
MMP13P45452 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP13P45452 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.11■□□□□ 0.17
MMP13P45452 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 Z97205.2-201ENST00000564697 1639 ntBASIC16.11■□□□□ 0.17
MMP13P45452 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP13P45452 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP13P45452 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
MMP13P45452 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP13P45452 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 AC148477.4-201ENST00000613430 1793 ntBASIC16.1■□□□□ 0.17
MMP13P45452 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 AC127383.1-201ENST00000444697 1800 ntBASIC16.1■□□□□ 0.17
MMP13P45452 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
MMP13P45452 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.1■□□□□ 0.17
MMP13P45452 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.1■□□□□ 0.17
MMP13P45452 AL512638.1-201ENST00000457493 794 ntBASIC16.1■□□□□ 0.17
MMP13P45452 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.1■□□□□ 0.17
MMP13P45452 SDHAP3-202ENST00000515467 728 ntBASIC16.1■□□□□ 0.17
MMP13P45452 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.1■□□□□ 0.17
MMP13P45452 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.1■□□□□ 0.17
MMP13P45452 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.1■□□□□ 0.17
MMP13P45452 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 AL109936.8-201ENST00000641772 604 ntBASIC16.1■□□□□ 0.17
MMP13P45452 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MMP13P45452 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MMP13P45452 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MMP13P45452 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
MMP13P45452 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP13P45452 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms