Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 AL009178.2-201ENST00000597278 2719 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC1A1P43005 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 REXO1L4P-201ENST00000605109 1937 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC1A1P43005 DNAJB3-202ENST00000449667 1266 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC1A1P43005 AC125807.1-201ENST00000483097 614 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC1A1P43005 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC1A1P43005 AC069120.2-201ENST00000524091 540 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 ZNF890P-202ENST00000530367 1156 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC1A1P43005 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC1A1P43005 AC000095.1-201ENST00000603208 874 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC1A1P43005 AL109936.8-201ENST00000641772 604 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 AC079781.4-201ENST00000641908 219 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC1A1P43005 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SLC1A1P43005 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC1A1P43005 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A1P43005 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC1A1P43005 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC1A1P43005 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC1A1P43005 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC1A1P43005 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC1A1P43005 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A1P43005 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A1P43005 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A1P43005 AL139400.1-201ENST00000366220 510 ntBASIC16.19■□□□□ 0.18
SLC1A1P43005 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC1A1P43005 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC1A1P43005 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC1A1P43005 KLF2P3-201ENST00000451977 1087 ntBASIC16.19■□□□□ 0.18
SLC1A1P43005 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC1A1P43005 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC1A1P43005 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC1A1P43005 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SLC1A1P43005 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 AC140878.1-201ENST00000565277 250 ntBASIC16.19■□□□□ 0.18
SLC1A1P43005 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
SLC1A1P43005 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.19■□□□□ 0.18
SLC1A1P43005 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC1A1P43005 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
SLC1A1P43005 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC1A1P43005 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC1A1P43005 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A1P43005 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A1P43005 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC1A1P43005 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A1P43005 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A1P43005 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
SLC1A1P43005 LINC00552-201ENST00000625151 2579 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms