Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL15A1P39059 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.32■□□□□ 0.68
COL15A1P39059 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.32■□□□□ 0.68
COL15A1P39059 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.31■□□□□ 0.68
COL15A1P39059 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COL15A1P39059 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 AC008132.1-202ENST00000342005 1389 ntBASIC19.31■□□□□ 0.68
COL15A1P39059 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COL15A1P39059 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.31■□□□□ 0.68
COL15A1P39059 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.31■□□□□ 0.68
COL15A1P39059 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.31■□□□□ 0.68
COL15A1P39059 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.31■□□□□ 0.68
COL15A1P39059 AC092127.1-201ENST00000567093 3455 ntBASIC19.31■□□□□ 0.68
COL15A1P39059 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.31■□□□□ 0.68
COL15A1P39059 AC020658.6-201ENST00000623564 1870 ntBASIC19.31■□□□□ 0.68
COL15A1P39059 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.31■□□□□ 0.68
COL15A1P39059 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 AC008741.2-201ENST00000612792 3115 ntBASIC19.31■□□□□ 0.68
COL15A1P39059 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.31■□□□□ 0.68
COL15A1P39059 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
COL15A1P39059 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.31■□□□□ 0.68
COL15A1P39059 GHSR-202ENST00000427970 912 ntBASIC19.31■□□□□ 0.68
COL15A1P39059 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.31■□□□□ 0.68
COL15A1P39059 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.31■□□□□ 0.68
COL15A1P39059 FTLP10-202ENST00000505798 471 ntBASIC19.31■□□□□ 0.68
COL15A1P39059 AC005740.2-201ENST00000511085 419 ntBASIC19.31■□□□□ 0.68
COL15A1P39059 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.31■□□□□ 0.68
COL15A1P39059 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.31■□□□□ 0.68
COL15A1P39059 RN7SL774P-201ENST00000577467 290 ntBASIC19.31■□□□□ 0.68
COL15A1P39059 MIR4722-201ENST00000578292 60 ntBASIC19.31■□□□□ 0.68
COL15A1P39059 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.31■□□□□ 0.68
COL15A1P39059 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
COL15A1P39059 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.31■□□□□ 0.68
COL15A1P39059 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COL15A1P39059 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.31■□□□□ 0.68
COL15A1P39059 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL15A1P39059 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.3■□□□□ 0.68
COL15A1P39059 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 KRT8P29-201ENST00000420409 1371 ntBASIC19.3■□□□□ 0.68
COL15A1P39059 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.3■□□□□ 0.68
COL15A1P39059 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COL15A1P39059 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.3■□□□□ 0.68
COL15A1P39059 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.3■□□□□ 0.68
COL15A1P39059 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COL15A1P39059 AL133466.1-201ENST00000447582 150 ntBASIC19.3■□□□□ 0.68
COL15A1P39059 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.3■□□□□ 0.68
COL15A1P39059 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.3■□□□□ 0.68
COL15A1P39059 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.3■□□□□ 0.68
COL15A1P39059 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.3■□□□□ 0.68
COL15A1P39059 DUX4L47-201ENST00000566374 394 ntBASIC19.3■□□□□ 0.68
COL15A1P39059 AC026740.1-201ENST00000607068 791 ntBASIC19.3■□□□□ 0.68
COL15A1P39059 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COL15A1P39059 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
COL15A1P39059 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL15A1P39059 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
COL15A1P39059 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COL15A1P39059 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
COL15A1P39059 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
COL15A1P39059 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
COL15A1P39059 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL15A1P39059 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
COL15A1P39059 DPM3-202ENST00000368399 517 ntBASIC19.29■□□□□ 0.68
COL15A1P39059 MIR33B-201ENST00000385104 96 ntBASIC19.29■□□□□ 0.68
COL15A1P39059 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms