Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.34■□□□□ 0.21
RFC1P35251 AC135586.1-201ENST00000539323 574 ntBASIC16.34■□□□□ 0.21
RFC1P35251 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.34■□□□□ 0.21
RFC1P35251 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
RFC1P35251 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.34■□□□□ 0.21
RFC1P35251 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RFC1P35251 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFC1P35251 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFC1P35251 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFC1P35251 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RFC1P35251 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RFC1P35251 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFC1P35251 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
RFC1P35251 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.33■□□□□ 0.21
RFC1P35251 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RFC1P35251 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
RFC1P35251 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.33■□□□□ 0.2
RFC1P35251 BASP1P1-201ENST00000430708 665 ntBASIC16.33■□□□□ 0.2
RFC1P35251 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.33■□□□□ 0.2
RFC1P35251 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.33■□□□□ 0.2
RFC1P35251 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.33■□□□□ 0.2
RFC1P35251 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
RFC1P35251 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.33■□□□□ 0.2
RFC1P35251 SRD5A3P1-201ENST00000603021 949 ntBASIC16.33■□□□□ 0.2
RFC1P35251 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RFC1P35251 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RFC1P35251 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.33■□□□□ 0.2
RFC1P35251 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC1P35251 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.33■□□□□ 0.2
RFC1P35251 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC1P35251 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RFC1P35251 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RFC1P35251 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RFC1P35251 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.32■□□□□ 0.2
RFC1P35251 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC1P35251 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RFC1P35251 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RFC1P35251 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC1P35251 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.32■□□□□ 0.2
RFC1P35251 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RFC1P35251 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.32■□□□□ 0.2
RFC1P35251 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RFC1P35251 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC1P35251 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
RFC1P35251 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC1P35251 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.32■□□□□ 0.2
RFC1P35251 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms