Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CTBP2P5-201ENST00000454986 1264 ntBASIC15.8■□□□□ 0.12
SLC6A4P31645 AC007551.1-201ENST00000457394 519 ntBASIC15.8■□□□□ 0.12
SLC6A4P31645 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SLC6A4P31645 KRT18P25-201ENST00000508931 1278 ntBASIC15.8■□□□□ 0.12
SLC6A4P31645 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A4P31645 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A4P31645 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SLC6A4P31645 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A4P31645 AL359881.2-201ENST00000602973 570 ntBASIC15.8■□□□□ 0.12
SLC6A4P31645 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A4P31645 MIR6805-201ENST00000615055 62 ntBASIC15.8■□□□□ 0.12
SLC6A4P31645 AC145423.3-201ENST00000615987 467 ntBASIC15.8■□□□□ 0.12
SLC6A4P31645 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A4P31645 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A4P31645 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A4P31645 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC6A4P31645 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 AL138709.1-201ENST00000614840 1693 ntBASIC15.79■□□□□ 0.12
SLC6A4P31645 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC6A4P31645 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.79■□□□□ 0.12
SLC6A4P31645 PPT1-215ENST00000641471 2368 ntBASIC15.79■□□□□ 0.12
SLC6A4P31645 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A4P31645 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.79■□□□□ 0.12
SLC6A4P31645 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A4P31645 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC6A4P31645 BOLA2P3-201ENST00000404566 256 ntBASIC15.79■□□□□ 0.12
SLC6A4P31645 AL139094.1-201ENST00000405549 1188 ntBASIC15.79■□□□□ 0.12
SLC6A4P31645 NUS1P3-201ENST00000423502 862 ntBASIC15.79■□□□□ 0.12
SLC6A4P31645 GHSR-202ENST00000427970 912 ntBASIC15.79■□□□□ 0.12
SLC6A4P31645 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC6A4P31645 AC114812.1-204ENST00000449669 728 ntBASIC15.79■□□□□ 0.12
SLC6A4P31645 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC6A4P31645 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.79■□□□□ 0.12
SLC6A4P31645 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A4P31645 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC6A4P31645 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC6A4P31645 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A4P31645 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC6A4P31645 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC6A4P31645 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC6A4P31645 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 KRT8P44-201ENST00000441609 1350 ntBASIC15.78■□□□□ 0.12
SLC6A4P31645 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SLC6A4P31645 MST1L-201ENST00000442552 2185 ntBASIC15.78■□□□□ 0.12
SLC6A4P31645 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC6A4P31645 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.78■□□□□ 0.12
SLC6A4P31645 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SLC6A4P31645 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 AL645937.2-201ENST00000396808 931 ntBASIC15.78■□□□□ 0.12
SLC6A4P31645 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC6A4P31645 AC016694.1-201ENST00000434179 700 ntBASIC15.78■□□□□ 0.12
SLC6A4P31645 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC6A4P31645 AC104989.1-201ENST00000519711 778 ntBASIC15.78■□□□□ 0.12
SLC6A4P31645 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC6A4P31645 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC6A4P31645 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC6A4P31645 AC025279.2-201ENST00000569730 653 ntBASIC15.78■□□□□ 0.12
SLC6A4P31645 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC6A4P31645 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms