Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HOXC12P31275 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HOXC12P31275 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.78□□□□□ -0.2
HOXC12P31275 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
HOXC12P31275 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.78□□□□□ -0.2
HOXC12P31275 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.78□□□□□ -0.2
HOXC12P31275 AC007389.4-201ENST00000454674 793 ntBASIC13.78□□□□□ -0.2
HOXC12P31275 ELK1P1-201ENST00000485699 580 ntBASIC13.78□□□□□ -0.2
HOXC12P31275 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HOXC12P31275 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.78□□□□□ -0.2
HOXC12P31275 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HOXC12P31275 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.78□□□□□ -0.2
HOXC12P31275 CTBP2P3-201ENST00000585629 1255 ntBASIC13.78□□□□□ -0.2
HOXC12P31275 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HOXC12P31275 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.78□□□□□ -0.2
HOXC12P31275 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.78□□□□□ -0.2
HOXC12P31275 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.78□□□□□ -0.2
HOXC12P31275 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HOXC12P31275 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
HOXC12P31275 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.78□□□□□ -0.2
HOXC12P31275 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.78□□□□□ -0.2
HOXC12P31275 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.78□□□□□ -0.2
HOXC12P31275 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.78□□□□□ -0.2
HOXC12P31275 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.78□□□□□ -0.2
HOXC12P31275 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HOXC12P31275 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HOXC12P31275 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.78□□□□□ -0.2
HOXC12P31275 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HOXC12P31275 AC092850.2-201ENST00000623821 2697 ntBASIC13.77□□□□□ -0.2
HOXC12P31275 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HOXC12P31275 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HOXC12P31275 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
HOXC12P31275 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HOXC12P31275 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.77□□□□□ -0.21
HOXC12P31275 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC12P31275 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
HOXC12P31275 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.77□□□□□ -0.21
HOXC12P31275 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.77□□□□□ -0.21
HOXC12P31275 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.77□□□□□ -0.21
HOXC12P31275 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 RPL13P2-201ENST00000440687 659 ntBASIC13.77□□□□□ -0.21
HOXC12P31275 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC12P31275 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 KRT18P43-201ENST00000469825 1281 ntBASIC13.77□□□□□ -0.21
HOXC12P31275 RPL13AP25-201ENST00000484130 612 ntBASIC13.77□□□□□ -0.21
HOXC12P31275 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC12P31275 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC12P31275 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC12P31275 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.77□□□□□ -0.21
HOXC12P31275 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC12P31275 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.77□□□□□ -0.21
HOXC12P31275 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 RARRES2P5-201ENST00000564013 466 ntBASIC13.77□□□□□ -0.21
HOXC12P31275 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.77□□□□□ -0.21
HOXC12P31275 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC12P31275 AC093726.1-201ENST00000608064 963 ntBASIC13.77□□□□□ -0.21
HOXC12P31275 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 AC112504.1-201ENST00000623415 1841 ntBASIC13.77□□□□□ -0.21
HOXC12P31275 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.77□□□□□ -0.21
HOXC12P31275 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HOXC12P31275 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms