Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.31■□□□□ 0.04
VARSP26640 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.31■□□□□ 0.04
VARSP26640 SPDYE12P-201ENST00000618416 771 ntBASIC15.31■□□□□ 0.04
VARSP26640 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.31■□□□□ 0.04
VARSP26640 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VARSP26640 KRT8P12-202ENST00000472924 1397 ntBASIC15.31■□□□□ 0.04
VARSP26640 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.31■□□□□ 0.04
VARSP26640 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.31■□□□□ 0.04
VARSP26640 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VARSP26640 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VARSP26640 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.31■□□□□ 0.04
VARSP26640 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.31■□□□□ 0.04
VARSP26640 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARSP26640 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.3■□□□□ 0.04
VARSP26640 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VARSP26640 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.3■□□□□ 0.04
VARSP26640 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VARSP26640 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.3■□□□□ 0.04
VARSP26640 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
VARSP26640 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 RPL37AP1-201ENST00000412502 279 ntBASIC15.3■□□□□ 0.04
VARSP26640 HCG24-202ENST00000414398 717 ntTSL 3 BASIC15.3■□□□□ 0.04
VARSP26640 AL080243.2-201ENST00000418783 582 ntBASIC15.3■□□□□ 0.04
VARSP26640 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
VARSP26640 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.3■□□□□ 0.04
VARSP26640 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.3■□□□□ 0.04
VARSP26640 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.3■□□□□ 0.04
VARSP26640 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.3■□□□□ 0.04
VARSP26640 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
VARSP26640 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.3■□□□□ 0.04
VARSP26640 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 AC097359.3-201ENST00000603982 1210 ntBASIC15.3■□□□□ 0.04
VARSP26640 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.3■□□□□ 0.04
VARSP26640 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.3■□□□□ 0.04
VARSP26640 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VARSP26640 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.3■□□□□ 0.04
VARSP26640 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VARSP26640 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.29■□□□□ 0.04
VARSP26640 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.29■□□□□ 0.04
VARSP26640 AL607033.1-201ENST00000623900 1599 ntBASIC15.29■□□□□ 0.04
VARSP26640 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.29■□□□□ 0.04
VARSP26640 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.29■□□□□ 0.04
VARSP26640 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
VARSP26640 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.29■□□□□ 0.04
VARSP26640 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.29■□□□□ 0.04
VARSP26640 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
VARSP26640 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VARSP26640 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.29■□□□□ 0.04
VARSP26640 AC097493.3-201ENST00000509725 367 ntBASIC15.29■□□□□ 0.04
VARSP26640 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.29■□□□□ 0.04
VARSP26640 MIR6752-201ENST00000618442 71 ntBASIC15.29■□□□□ 0.04
VARSP26640 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms