Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DPA1P20036 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 SBF1P1-201ENST00000444527 5631 ntBASIC15.62■□□□□ 0.09
HLA-DPA1P20036 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 CICP11-201ENST00000434745 2827 ntBASIC15.62■□□□□ 0.09
HLA-DPA1P20036 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AC023310.3-201ENST00000557027 670 ntBASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AC100756.1-201ENST00000562736 682 ntBASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AC138749.3-201ENST00000567691 622 ntBASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AC092364.2-202ENST00000597012 1073 ntBASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AC116165.1-201ENST00000611806 668 ntBASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 AC068418.2-201ENST00000577309 3703 ntBASIC15.62■□□□□ 0.09
HLA-DPA1P20036 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 MROH4P-201ENST00000431302 1578 ntBASIC15.62■□□□□ 0.09
HLA-DPA1P20036 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DPA1P20036 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 FAM207CP-201ENST00000443486 507 ntBASIC15.61■□□□□ 0.09
HLA-DPA1P20036 SPTLC1P1-201ENST00000447199 261 ntBASIC15.61■□□□□ 0.09
HLA-DPA1P20036 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 AC055876.2-201ENST00000531834 546 ntBASIC15.61■□□□□ 0.09
HLA-DPA1P20036 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DPA1P20036 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms