Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL2P13500 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL2P13500 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL2P13500 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 RN7SL399P-201ENST00000471648 279 ntBASIC13.51□□□□□ -0.25
CCL2P13500 FAM86LP-201ENST00000478302 853 ntBASIC13.51□□□□□ -0.25
CCL2P13500 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL2P13500 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.51□□□□□ -0.25
CCL2P13500 AC055876.2-201ENST00000531834 546 ntBASIC13.51□□□□□ -0.25
CCL2P13500 AC036164.1-201ENST00000570544 333 ntBASIC13.51□□□□□ -0.25
CCL2P13500 AL391069.4-201ENST00000609583 481 ntBASIC13.51□□□□□ -0.25
CCL2P13500 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CCL2P13500 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CCL2P13500 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCL2P13500 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL2P13500 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 AC126177.1-201ENST00000547829 2218 ntBASIC13.51□□□□□ -0.25
CCL2P13500 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CCL2P13500 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL2P13500 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 PCDHA3-202ENST00000532566 4594 ntBASIC13.5□□□□□ -0.25
CCL2P13500 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL2P13500 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL2P13500 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCL2P13500 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CCL2P13500 PIN1P1-201ENST00000412108 996 ntBASIC13.5□□□□□ -0.25
CCL2P13500 AC098850.1-201ENST00000419919 790 ntBASIC13.5□□□□□ -0.25
CCL2P13500 DFFBP1-201ENST00000433250 979 ntBASIC13.5□□□□□ -0.25
CCL2P13500 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL2P13500 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL2P13500 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL2P13500 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.5□□□□□ -0.25
CCL2P13500 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL2P13500 API5-211ENST00000534695 560 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL2P13500 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 AC123567.1-201ENST00000548294 1261 ntBASIC13.5□□□□□ -0.25
CCL2P13500 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
CCL2P13500 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 AC025181.2-201ENST00000606994 802 ntBASIC13.5□□□□□ -0.25
CCL2P13500 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
CCL2P13500 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.5□□□□□ -0.25
CCL2P13500 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 AC007431.3-201ENST00000623221 587 ntBASIC13.5□□□□□ -0.25
CCL2P13500 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.5□□□□□ -0.25
CCL2P13500 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL2P13500 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL2P13500 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL2P13500 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCL2P13500 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms