Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 KRT8P48-201ENST00000515599 1220 ntBASIC12.67□□□□□ -0.38
DEFA4P12838 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.67□□□□□ -0.38
DEFA4P12838 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.67□□□□□ -0.38
DEFA4P12838 AP000842.3-202ENST00000569238 1080 ntBASIC12.67□□□□□ -0.38
DEFA4P12838 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
DEFA4P12838 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.66□□□□□ -0.38
DEFA4P12838 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 AC005840.4-201ENST00000541242 2494 ntBASIC12.66□□□□□ -0.38
DEFA4P12838 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
DEFA4P12838 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 FAM220BP-201ENST00000377689 816 ntBASIC12.66□□□□□ -0.38
DEFA4P12838 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.66□□□□□ -0.38
DEFA4P12838 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 PGAM5P1-201ENST00000518923 814 ntBASIC12.66□□□□□ -0.38
DEFA4P12838 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.66□□□□□ -0.38
DEFA4P12838 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
DEFA4P12838 AC061975.2-201ENST00000581722 295 ntBASIC12.66□□□□□ -0.38
DEFA4P12838 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.66□□□□□ -0.38
DEFA4P12838 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
DEFA4P12838 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DEFA4P12838 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
DEFA4P12838 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.66□□□□□ -0.38
DEFA4P12838 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
DEFA4P12838 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms