Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB1P09429 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGB1P09429 AC004790.1-201ENST00000612686 536 ntBASIC18.23■□□□□ 0.51
HMGB1P09429 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
HMGB1P09429 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB1P09429 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HMGB1P09429 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB1P09429 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB1P09429 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB1P09429 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB1P09429 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB1P09429 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HMGB1P09429 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB1P09429 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB1P09429 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB1P09429 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGB1P09429 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HMGB1P09429 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGB1P09429 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HMGB1P09429 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGB1P09429 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGB1P09429 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGB1P09429 AC026410.3-201ENST00000514280 936 ntBASIC18.22■□□□□ 0.51
HMGB1P09429 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGB1P09429 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGB1P09429 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGB1P09429 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HMGB1P09429 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 AJ011932.1-201ENST00000621707 465 ntBASIC18.22■□□□□ 0.51
HMGB1P09429 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
HMGB1P09429 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGB1P09429 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
HMGB1P09429 DRD5P1-201ENST00000456605 1438 ntBASIC18.22■□□□□ 0.51
HMGB1P09429 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGB1P09429 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGB1P09429 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGB1P09429 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB1P09429 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGB1P09429 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HMGB1P09429 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGB1P09429 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HMGB1P09429 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HMGB1P09429 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGB1P09429 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGB1P09429 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGB1P09429 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGB1P09429 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGB1P09429 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGB1P09429 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.21■□□□□ 0.51
HMGB1P09429 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.21■□□□□ 0.51
HMGB1P09429 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.21■□□□□ 0.51
HMGB1P09429 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGB1P09429 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
HMGB1P09429 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.21■□□□□ 0.51
HMGB1P09429 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGB1P09429 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HMGB1P09429 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGB1P09429 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HMGB1P09429 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB1P09429 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGB1P09429 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
HMGB1P09429 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HMGB1P09429 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HMGB1P09429 ACE3P-201ENST00000423435 1973 ntBASIC18.21■□□□□ 0.5
HMGB1P09429 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGB1P09429 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGB1P09429 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGB1P09429 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGB1P09429 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGB1P09429 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HMGB1P09429 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGB1P09429 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms