Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.27□□□□□ -0.13
THBS1P07996 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
THBS1P07996 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
THBS1P07996 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.27□□□□□ -0.13
THBS1P07996 AC055876.3-201ENST00000431496 288 ntBASIC14.27□□□□□ -0.13
THBS1P07996 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.27□□□□□ -0.13
THBS1P07996 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.27□□□□□ -0.13
THBS1P07996 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.27□□□□□ -0.13
THBS1P07996 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.27□□□□□ -0.13
THBS1P07996 AC138649.4-201ENST00000612222 287 ntBASIC14.27□□□□□ -0.13
THBS1P07996 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.27□□□□□ -0.13
THBS1P07996 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
THBS1P07996 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
THBS1P07996 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
THBS1P07996 REXO1L2P-201ENST00000425429 2069 ntBASIC14.27□□□□□ -0.13
THBS1P07996 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
THBS1P07996 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
THBS1P07996 CICP23-201ENST00000605013 2741 ntBASIC14.27□□□□□ -0.13
THBS1P07996 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
THBS1P07996 FGD5P1-202ENST00000614866 2498 ntBASIC14.26□□□□□ -0.13
THBS1P07996 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
THBS1P07996 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.26□□□□□ -0.13
THBS1P07996 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
THBS1P07996 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.26□□□□□ -0.13
THBS1P07996 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
THBS1P07996 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.26□□□□□ -0.13
THBS1P07996 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.26□□□□□ -0.13
THBS1P07996 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.26□□□□□ -0.13
THBS1P07996 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.26□□□□□ -0.13
THBS1P07996 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.26□□□□□ -0.13
THBS1P07996 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
THBS1P07996 AC097493.3-201ENST00000509725 367 ntBASIC14.26□□□□□ -0.13
THBS1P07996 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.26□□□□□ -0.13
THBS1P07996 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.26□□□□□ -0.13
THBS1P07996 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 AC044860.1-202ENST00000559481 777 ntBASIC14.26□□□□□ -0.13
THBS1P07996 AC092337.1-201ENST00000568699 1129 ntBASIC14.26□□□□□ -0.13
THBS1P07996 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.26□□□□□ -0.13
THBS1P07996 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 MIR4745-201ENST00000577608 62 ntBASIC14.26□□□□□ -0.13
THBS1P07996 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.26□□□□□ -0.13
THBS1P07996 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC14.26□□□□□ -0.13
THBS1P07996 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.26□□□□□ -0.13
THBS1P07996 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.26□□□□□ -0.13
THBS1P07996 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
THBS1P07996 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
THBS1P07996 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 AJ011931.1-201ENST00000618749 2492 ntBASIC14.25□□□□□ -0.13
THBS1P07996 BTBD7P1-201ENST00000447253 1453 ntBASIC14.25□□□□□ -0.13
THBS1P07996 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 AC100757.3-201ENST00000622361 1406 ntBASIC14.25□□□□□ -0.13
THBS1P07996 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.25□□□□□ -0.13
THBS1P07996 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
THBS1P07996 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
THBS1P07996 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.25□□□□□ -0.13
THBS1P07996 AC114501.2-201ENST00000439631 535 ntBASIC14.25□□□□□ -0.13
THBS1P07996 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms