Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CTSDP07339 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTSDP07339 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.9□□□□□ -0.34
CTSDP07339 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CTSDP07339 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CTSDP07339 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 AC142381.1-201ENST00000426099 345 ntBASIC12.89□□□□□ -0.35
CTSDP07339 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 KRT19P2-202ENST00000557173 1012 ntBASIC12.89□□□□□ -0.35
CTSDP07339 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.89□□□□□ -0.35
CTSDP07339 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.89□□□□□ -0.35
CTSDP07339 MIR7706-201ENST00000613747 67 ntBASIC12.89□□□□□ -0.35
CTSDP07339 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.89□□□□□ -0.35
CTSDP07339 AC008267.7-201ENST00000624570 1194 ntBASIC12.89□□□□□ -0.35
CTSDP07339 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.89□□□□□ -0.35
CTSDP07339 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CTSDP07339 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CTSDP07339 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.89□□□□□ -0.35
CTSDP07339 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.88□□□□□ -0.35
CTSDP07339 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CTSDP07339 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CTSDP07339 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.88□□□□□ -0.35
CTSDP07339 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CTSDP07339 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.88□□□□□ -0.35
CTSDP07339 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.88□□□□□ -0.35
CTSDP07339 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.88□□□□□ -0.35
CTSDP07339 AC027307.2-201ENST00000591252 911 ntBASIC12.88□□□□□ -0.35
CTSDP07339 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms