Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCCBP05166 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
PCCBP05166 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
PCCBP05166 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.28■□□□□ 0.04
PCCBP05166 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 KRT8P35-201ENST00000483942 1338 ntBASIC15.28■□□□□ 0.04
PCCBP05166 AC090616.6-203ENST00000579186 1945 ntBASIC15.28■□□□□ 0.04
PCCBP05166 RNU1-114P-201ENST00000365297 166 ntBASIC15.28■□□□□ 0.04
PCCBP05166 ACKR1-201ENST00000368121 1240 ntBASIC15.28■□□□□ 0.04
PCCBP05166 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.28■□□□□ 0.04
PCCBP05166 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.28■□□□□ 0.04
PCCBP05166 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.28■□□□□ 0.04
PCCBP05166 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.28■□□□□ 0.04
PCCBP05166 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.28■□□□□ 0.04
PCCBP05166 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 AC004066.1-201ENST00000502488 802 ntBASIC15.28■□□□□ 0.04
PCCBP05166 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.28■□□□□ 0.04
PCCBP05166 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.28■□□□□ 0.04
PCCBP05166 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.28■□□□□ 0.04
PCCBP05166 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 MIR6752-201ENST00000618442 71 ntBASIC15.28■□□□□ 0.04
PCCBP05166 COX11-210ENST00000639671 696 ntBASIC15.28■□□□□ 0.04
PCCBP05166 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.28■□□□□ 0.04
PCCBP05166 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PCCBP05166 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCCBP05166 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCCBP05166 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
PCCBP05166 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCCBP05166 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.27■□□□□ 0.04
PCCBP05166 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.27■□□□□ 0.04
PCCBP05166 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCCBP05166 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.27■□□□□ 0.04
PCCBP05166 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
PCCBP05166 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.27■□□□□ 0.04
PCCBP05166 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.27■□□□□ 0.04
PCCBP05166 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCCBP05166 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PCCBP05166 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.27■□□□□ 0.04
PCCBP05166 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCCBP05166 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.27■□□□□ 0.04
PCCBP05166 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.27■□□□□ 0.04
PCCBP05166 AC007551.1-201ENST00000457394 519 ntBASIC15.27■□□□□ 0.04
PCCBP05166 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
PCCBP05166 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.27■□□□□ 0.04
PCCBP05166 AC119751.2-201ENST00000504529 210 ntBASIC15.27■□□□□ 0.04
PCCBP05166 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.27■□□□□ 0.04
PCCBP05166 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.27■□□□□ 0.04
PCCBP05166 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.27■□□□□ 0.04
PCCBP05166 AP005482.1-201ENST00000563722 1273 ntBASIC15.27■□□□□ 0.04
PCCBP05166 AC244669.2-201ENST00000612320 853 ntBASIC15.27■□□□□ 0.04
PCCBP05166 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.27■□□□□ 0.03
PCCBP05166 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCCBP05166 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCCBP05166 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCCBP05166 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.27■□□□□ 0.03
PCCBP05166 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCCBP05166 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.27■□□□□ 0.03
PCCBP05166 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
PCCBP05166 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.27■□□□□ 0.03
PCCBP05166 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCCBP05166 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.27■□□□□ 0.03
PCCBP05166 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.27■□□□□ 0.03
PCCBP05166 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.27■□□□□ 0.03
PCCBP05166 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCCBP05166 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCCBP05166 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
PCCBP05166 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.27■□□□□ 0.03
PCCBP05166 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCCBP05166 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCCBP05166 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.26■□□□□ 0.03
PCCBP05166 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms