Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
MT-ND1P03886 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.67□□□□□ -0.06
MT-ND1P03886 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.67□□□□□ -0.06
MT-ND1P03886 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.67□□□□□ -0.06
MT-ND1P03886 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
MT-ND1P03886 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.67□□□□□ -0.06
MT-ND1P03886 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 AC073389.1-201ENST00000595595 795 ntBASIC14.67□□□□□ -0.06
MT-ND1P03886 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.67□□□□□ -0.06
MT-ND1P03886 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.67□□□□□ -0.06
MT-ND1P03886 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.67□□□□□ -0.06
MT-ND1P03886 AC099522.2-201ENST00000607001 744 ntBASIC14.67□□□□□ -0.06
MT-ND1P03886 AC027601.4-201ENST00000611259 610 ntBASIC14.67□□□□□ -0.06
MT-ND1P03886 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.67□□□□□ -0.06
MT-ND1P03886 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.67□□□□□ -0.06
MT-ND1P03886 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.67□□□□□ -0.06
MT-ND1P03886 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.67□□□□□ -0.06
MT-ND1P03886 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MT-ND1P03886 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 AL928921.2-201ENST00000641325 2442 ntBASIC14.66□□□□□ -0.06
MT-ND1P03886 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MT-ND1P03886 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.66□□□□□ -0.06
MT-ND1P03886 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 KRT18P3-201ENST00000451602 1288 ntBASIC14.66□□□□□ -0.06
MT-ND1P03886 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.66□□□□□ -0.06
MT-ND1P03886 AC106730.1-201ENST00000566722 1090 ntBASIC14.66□□□□□ -0.06
MT-ND1P03886 FAM197Y3-203ENST00000618346 717 ntBASIC14.66□□□□□ -0.06
MT-ND1P03886 AC092865.6-201ENST00000642101 219 ntBASIC14.66□□□□□ -0.06
MT-ND1P03886 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
MT-ND1P03886 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.66□□□□□ -0.06
MT-ND1P03886 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
MT-ND1P03886 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms