Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC007663.3-201ENST00000609632 465 ntBASIC16.66■□□□□ 0.26
CHRNA1P02708 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.66■□□□□ 0.26
CHRNA1P02708 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 AC138466.3-201ENST00000619983 221 ntBASIC16.66■□□□□ 0.26
CHRNA1P02708 AP001002.3-201ENST00000623482 206 ntBASIC16.66■□□□□ 0.26
CHRNA1P02708 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA1P02708 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA1P02708 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA1P02708 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA1P02708 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA1P02708 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA1P02708 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA1P02708 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA1P02708 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA1P02708 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNA1P02708 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNA1P02708 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 AC044849.1-201ENST00000519737 1188 ntBASIC16.65■□□□□ 0.26
CHRNA1P02708 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA1P02708 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNA1P02708 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.65■□□□□ 0.26
CHRNA1P02708 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA1P02708 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.65■□□□□ 0.26
CHRNA1P02708 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA1P02708 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHRNA1P02708 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 PRAL-201ENST00000624952 3286 ntBASIC16.65■□□□□ 0.26
CHRNA1P02708 AC011270.2-201ENST00000624293 2550 ntBASIC16.65■□□□□ 0.26
CHRNA1P02708 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA1P02708 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA1P02708 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA1P02708 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHRNA1P02708 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA1P02708 AL157414.3-201ENST00000624276 1954 ntBASIC16.64■□□□□ 0.25
CHRNA1P02708 MST1L-201ENST00000442552 2185 ntBASIC16.64■□□□□ 0.25
CHRNA1P02708 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA1P02708 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA1P02708 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA1P02708 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CHRNA1P02708 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CHRNA1P02708 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.64■□□□□ 0.25
CHRNA1P02708 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 MESTP3-201ENST00000503460 968 ntBASIC16.64■□□□□ 0.25
CHRNA1P02708 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA1P02708 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA1P02708 AC106872.11-201ENST00000605838 421 ntBASIC16.64■□□□□ 0.25
CHRNA1P02708 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
CHRNA1P02708 AC105250.1-201ENST00000509378 2057 ntBASIC16.64■□□□□ 0.25
CHRNA1P02708 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA1P02708 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA1P02708 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA1P02708 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA1P02708 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CHRNA1P02708 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA1P02708 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA1P02708 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms