Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.82□□□□□ -0.2
CNOT4O95628 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CNOT4O95628 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CNOT4O95628 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CNOT4O95628 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.81□□□□□ -0.2
CNOT4O95628 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.81□□□□□ -0.2
CNOT4O95628 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CNOT4O95628 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CNOT4O95628 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CNOT4O95628 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
CNOT4O95628 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.81□□□□□ -0.2
CNOT4O95628 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.81□□□□□ -0.2
CNOT4O95628 RPS2P32-201ENST00000439199 892 ntBASIC13.81□□□□□ -0.2
CNOT4O95628 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.81□□□□□ -0.2
CNOT4O95628 AC015910.1-201ENST00000579400 975 ntBASIC13.81□□□□□ -0.2
CNOT4O95628 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CNOT4O95628 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 CHCHD2P3-201ENST00000603038 451 ntBASIC13.81□□□□□ -0.2
CNOT4O95628 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CNOT4O95628 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 OR2I1P-210ENST00000642037 4691 ntBASIC13.81□□□□□ -0.2
CNOT4O95628 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CNOT4O95628 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CNOT4O95628 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.8□□□□□ -0.2
CNOT4O95628 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 AL121723.1-201ENST00000445194 1519 ntBASIC13.8□□□□□ -0.2
CNOT4O95628 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CNOT4O95628 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.8□□□□□ -0.2
CNOT4O95628 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.8□□□□□ -0.2
CNOT4O95628 KRT18P64-201ENST00000434946 1219 ntBASIC13.8□□□□□ -0.2
CNOT4O95628 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 FAM86LP-201ENST00000478302 853 ntBASIC13.8□□□□□ -0.2
CNOT4O95628 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.8□□□□□ -0.2
CNOT4O95628 AC092552.1-201ENST00000547243 906 ntBASIC13.8□□□□□ -0.2
CNOT4O95628 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.8□□□□□ -0.2
CNOT4O95628 AC132938.2-201ENST00000579188 680 ntBASIC13.8□□□□□ -0.2
CNOT4O95628 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.8□□□□□ -0.2
CNOT4O95628 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.8□□□□□ -0.2
CNOT4O95628 MIR6805-201ENST00000615055 62 ntBASIC13.8□□□□□ -0.2
CNOT4O95628 AL591163.1-201ENST00000641757 987 ntBASIC13.8□□□□□ -0.2
CNOT4O95628 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.8□□□□□ -0.2
CNOT4O95628 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.8□□□□□ -0.2
CNOT4O95628 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.8□□□□□ -0.2
CNOT4O95628 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CNOT4O95628 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CNOT4O95628 AC023824.1-201ENST00000562945 2975 ntBASIC13.8□□□□□ -0.2
CNOT4O95628 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms