Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
POLR1AO95602 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC21.96■■□□□ 1.11
POLR1AO95602 BID-213ENST00000615414 2236 ntTSL 5 BASIC21.96■■□□□ 1.11
POLR1AO95602 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR1AO95602 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR1AO95602 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC21.96■■□□□ 1.11
POLR1AO95602 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
POLR1AO95602 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC21.96■■□□□ 1.11
POLR1AO95602 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC21.96■■□□□ 1.11
POLR1AO95602 RPL17P45-201ENST00000586289 509 ntBASIC21.96■■□□□ 1.11
POLR1AO95602 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC21.96■■□□□ 1.11
POLR1AO95602 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC21.96■■□□□ 1.11
POLR1AO95602 AC087045.2-201ENST00000606279 1003 ntBASIC21.96■■□□□ 1.11
POLR1AO95602 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
POLR1AO95602 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR1AO95602 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR1AO95602 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.96■■□□□ 1.11
POLR1AO95602 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC21.96■■□□□ 1.11
POLR1AO95602 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC21.96■■□□□ 1.11
POLR1AO95602 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC21.96■■□□□ 1.11
POLR1AO95602 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR1AO95602 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
POLR1AO95602 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
POLR1AO95602 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 LCK-206ENST00000373564 2137 ntTSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 RCC2P8-201ENST00000502779 1035 ntBASIC21.95■■□□□ 1.1
POLR1AO95602 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
POLR1AO95602 STUB1-204ENST00000564370 875 ntTSL 2 BASIC21.95■■□□□ 1.1
POLR1AO95602 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC21.95■■□□□ 1.1
POLR1AO95602 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC21.95■■□□□ 1.1
POLR1AO95602 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC21.95■■□□□ 1.1
POLR1AO95602 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
POLR1AO95602 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 AL157791.1-201ENST00000553667 1699 ntBASIC21.95■■□□□ 1.1
POLR1AO95602 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 MVK-214ENST00000629016 1591 ntTSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
POLR1AO95602 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
POLR1AO95602 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC21.95■■□□□ 1.1
POLR1AO95602 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
POLR1AO95602 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
POLR1AO95602 IDS-203ENST00000428056 1213 ntTSL 2 BASIC21.94■■□□□ 1.1
POLR1AO95602 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC21.94■■□□□ 1.1
POLR1AO95602 AC005324.6-201ENST00000587972 613 ntBASIC21.94■■□□□ 1.1
POLR1AO95602 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC21.94■■□□□ 1.1
POLR1AO95602 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
POLR1AO95602 GMFG-209ENST00000600322 622 ntTSL 5 BASIC21.94■■□□□ 1.1
POLR1AO95602 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
POLR1AO95602 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
POLR1AO95602 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC21.94■■□□□ 1.1
POLR1AO95602 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC21.94■■□□□ 1.1
POLR1AO95602 NEU3-205ENST00000531619 582 ntTSL 5 BASIC21.94■■□□□ 1.1
POLR1AO95602 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.94■■□□□ 1.1
POLR1AO95602 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
POLR1AO95602 AC092171.5-201ENST00000608012 942 ntBASIC21.94■■□□□ 1.1
POLR1AO95602 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.94■■□□□ 1.1
POLR1AO95602 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR1AO95602 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
POLR1AO95602 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC21.93■■□□□ 1.1
POLR1AO95602 CICP13-201ENST00000422015 2789 ntBASIC21.93■■□□□ 1.1
POLR1AO95602 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
POLR1AO95602 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
POLR1AO95602 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
POLR1AO95602 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC21.93■■□□□ 1.1
POLR1AO95602 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.93■■□□□ 1.1
POLR1AO95602 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
POLR1AO95602 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
POLR1AO95602 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.93■■□□□ 1.1
POLR1AO95602 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC21.93■■□□□ 1.1
POLR1AO95602 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
POLR1AO95602 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
POLR1AO95602 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms