Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK1BO75841 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK1BO75841 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 VENTXP7-201ENST00000475503 772 ntBASIC13.49□□□□□ -0.25
UPK1BO75841 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK1BO75841 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.49□□□□□ -0.25
UPK1BO75841 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK1BO75841 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UPK1BO75841 PI4KAP1-204ENST00000612579 1703 ntBASIC13.49□□□□□ -0.25
UPK1BO75841 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UPK1BO75841 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.49□□□□□ -0.25
UPK1BO75841 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK1BO75841 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.49□□□□□ -0.25
UPK1BO75841 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UPK1BO75841 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UPK1BO75841 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.49□□□□□ -0.25
UPK1BO75841 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 AC131902.2-201ENST00000566892 2172 ntBASIC13.48□□□□□ -0.25
UPK1BO75841 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
UPK1BO75841 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.48□□□□□ -0.25
UPK1BO75841 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 TSPY22P-201ENST00000427496 604 ntBASIC13.48□□□□□ -0.25
UPK1BO75841 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.48□□□□□ -0.25
UPK1BO75841 COX11P1-201ENST00000489116 835 ntBASIC13.48□□□□□ -0.25
UPK1BO75841 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.48□□□□□ -0.25
UPK1BO75841 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 AC243562.2-201ENST00000561247 970 ntBASIC13.48□□□□□ -0.25
UPK1BO75841 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.48□□□□□ -0.25
UPK1BO75841 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.48□□□□□ -0.25
UPK1BO75841 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
UPK1BO75841 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.48□□□□□ -0.25
UPK1BO75841 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
UPK1BO75841 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
UPK1BO75841 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
UPK1BO75841 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
UPK1BO75841 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UPK1BO75841 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.47□□□□□ -0.25
UPK1BO75841 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UPK1BO75841 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms