Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.12□□□□□ -0.47
CUBNO60494 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.12□□□□□ -0.47
CUBNO60494 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
CUBNO60494 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.12□□□□□ -0.47
CUBNO60494 AL357563.1-201ENST00000404728 395 ntBASIC12.12□□□□□ -0.47
CUBNO60494 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 AC079112.1-201ENST00000454972 939 ntBASIC12.12□□□□□ -0.47
CUBNO60494 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.12□□□□□ -0.47
CUBNO60494 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC12.12□□□□□ -0.47
CUBNO60494 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 AC011270.2-201ENST00000624293 2550 ntBASIC12.12□□□□□ -0.47
CUBNO60494 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.12□□□□□ -0.47
CUBNO60494 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CUBNO60494 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 NKILA-202ENST00000614771 2598 ntBASIC12.12□□□□□ -0.47
CUBNO60494 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.12□□□□□ -0.47
CUBNO60494 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC12.12□□□□□ -0.47
CUBNO60494 RN7SL67P-201ENST00000492147 296 ntBASIC12.12□□□□□ -0.47
CUBNO60494 AC006158.1-201ENST00000610661 249 ntBASIC12.12□□□□□ -0.47
CUBNO60494 AC006453.1-201ENST00000636037 1257 ntBASIC12.12□□□□□ -0.47
CUBNO60494 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.12□□□□□ -0.47
CUBNO60494 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CUBNO60494 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CUBNO60494 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CUBNO60494 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.11□□□□□ -0.47
CUBNO60494 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.11□□□□□ -0.47
CUBNO60494 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 AGPAT5P1-201ENST00000455855 1019 ntBASIC12.11□□□□□ -0.47
CUBNO60494 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC12.11□□□□□ -0.47
CUBNO60494 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.11□□□□□ -0.47
CUBNO60494 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC12.11□□□□□ -0.47
CUBNO60494 C2orf69P1-201ENST00000563532 1093 ntBASIC12.11□□□□□ -0.47
CUBNO60494 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CUBNO60494 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.11□□□□□ -0.47
CUBNO60494 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CUBNO60494 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.11□□□□□ -0.47
CUBNO60494 AC010141.1-201ENST00000411585 623 ntBASIC12.11□□□□□ -0.47
CUBNO60494 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CUBNO60494 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.11□□□□□ -0.47
CUBNO60494 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.11□□□□□ -0.47
CUBNO60494 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.11□□□□□ -0.47
CUBNO60494 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.11□□□□□ -0.47
CUBNO60494 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.11□□□□□ -0.47
CUBNO60494 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CUBNO60494 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CUBNO60494 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.11□□□□□ -0.47
CUBNO60494 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms