Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD2O14647 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC20.83■□□□□ 0.93
CHD2O14647 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHD2O14647 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD2O14647 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHD2O14647 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHD2O14647 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD2O14647 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD2O14647 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.83■□□□□ 0.93
CHD2O14647 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20.83■□□□□ 0.93
CHD2O14647 LINC00634-202ENST00000505157 222 ntBASIC20.83■□□□□ 0.93
CHD2O14647 AC114947.1-202ENST00000514136 344 ntBASIC20.83■□□□□ 0.93
CHD2O14647 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC20.83■□□□□ 0.93
CHD2O14647 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC20.83■□□□□ 0.93
CHD2O14647 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.83■□□□□ 0.93
CHD2O14647 BX088702.1-201ENST00000610784 235 ntBASIC20.83■□□□□ 0.93
CHD2O14647 AC009145.4-201ENST00000625119 1294 ntBASIC20.83■□□□□ 0.93
CHD2O14647 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD2O14647 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CHD2O14647 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC20.83■□□□□ 0.93
CHD2O14647 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD2O14647 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHD2O14647 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD2O14647 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD2O14647 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC20.83■□□□□ 0.92
CHD2O14647 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHD2O14647 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC20.83■□□□□ 0.92
CHD2O14647 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC20.83■□□□□ 0.92
CHD2O14647 AC092638.2-201ENST00000441105 947 ntBASIC20.83■□□□□ 0.92
CHD2O14647 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHD2O14647 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC20.83■□□□□ 0.92
CHD2O14647 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD2O14647 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC20.83■□□□□ 0.92
CHD2O14647 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD2O14647 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD2O14647 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD2O14647 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD2O14647 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD2O14647 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD2O14647 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD2O14647 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC20.82■□□□□ 0.92
CHD2O14647 GCOM2-201ENST00000509133 1104 ntBASIC20.82■□□□□ 0.92
CHD2O14647 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.82■□□□□ 0.92
CHD2O14647 CR383656.3-201ENST00000551315 183 ntBASIC20.82■□□□□ 0.92
CHD2O14647 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.82■□□□□ 0.92
CHD2O14647 RN7SL596P-201ENST00000582123 288 ntBASIC20.82■□□□□ 0.92
CHD2O14647 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD2O14647 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD2O14647 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD2O14647 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD2O14647 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CHD2O14647 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.81■□□□□ 0.92
CHD2O14647 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC20.81■□□□□ 0.92
CHD2O14647 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC20.81■□□□□ 0.92
CHD2O14647 AC009560.1-201ENST00000620208 434 ntBASIC20.81■□□□□ 0.92
CHD2O14647 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD2O14647 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 AC092364.2-201ENST00000596710 2692 ntBASIC20.81■□□□□ 0.92
CHD2O14647 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHD2O14647 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.81■□□□□ 0.92
CHD2O14647 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC20.81■□□□□ 0.92
CHD2O14647 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC20.81■□□□□ 0.92
CHD2O14647 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CHD2O14647 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD2O14647 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD2O14647 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CHD2O14647 ZBED1P1-201ENST00000502364 1930 ntBASIC20.8■□□□□ 0.92
CHD2O14647 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD2O14647 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD2O14647 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CHD2O14647 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.8■□□□□ 0.92
CHD2O14647 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD2O14647 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD2O14647 AL512306.1-201ENST00000432698 848 ntBASIC20.8■□□□□ 0.92
CHD2O14647 RN7SL396P-201ENST00000471086 295 ntBASIC20.8■□□□□ 0.92
CHD2O14647 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.8■□□□□ 0.92
CHD2O14647 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC20.8■□□□□ 0.92
CHD2O14647 MIR3180-2-201ENST00000581748 88 ntBASIC20.8■□□□□ 0.92
CHD2O14647 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.8■□□□□ 0.92
CHD2O14647 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD2O14647 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.8■□□□□ 0.92
CHD2O14647 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHD2O14647 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CHD2O14647 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.79■□□□□ 0.92
CHD2O14647 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHD2O14647 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms