Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01546A6NGU7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 AC004241.5-201ENST00000623870 2448 ntBASIC10.88□□□□□ -0.67
LINC01546A6NGU7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 AZGP1P1-201ENST00000411909 902 ntBASIC10.88□□□□□ -0.67
LINC01546A6NGU7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 AL161645.1-201ENST00000622716 1255 ntBASIC10.88□□□□□ -0.67
LINC01546A6NGU7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01546A6NGU7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 FAM220BP-201ENST00000377689 816 ntBASIC10.87□□□□□ -0.67
LINC01546A6NGU7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms