Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.35■□□□□ 0.69
LOC102724428A0A0B4J2F2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC098935.1-201ENST00000446057 611 ntBASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC073150.1-201ENST00000450406 1084 ntBASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC090857.1-201ENST00000527400 390 ntBASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC011491.1-203ENST00000637688 543 ntBASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 NAP1L6-202ENST00000641404 1222 ntBASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 NKILA-202ENST00000614771 2598 ntBASIC19.34■□□□□ 0.69
LOC102724428A0A0B4J2F2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 AC020910.5-201ENST00000623668 1865 ntBASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LOC102724428A0A0B4J2F2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 FAM58BP-201ENST00000439056 645 ntBASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 KLF2P1-201ENST00000447438 1042 ntBASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 NOC2LP1-201ENST00000450578 752 ntBASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC011840.2-201ENST00000563063 1520 ntBASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC009090.5-201ENST00000624886 2285 ntBASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LOC102724428A0A0B4J2F2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 RN7SL181P-201ENST00000462921 277 ntBASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 NPM1P43-201ENST00000558669 786 ntBASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 RN7SL736P-201ENST00000613111 269 ntBASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms