Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AC023157.3-201ENST00000619086 2088 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AC126335.2-201ENST00000623362 4637 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 MIR193BHG-211ENST00000641433 5365 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 RPL37AP1-201ENST00000412502 279 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 HIST3H2BA-201ENST00000436555 524 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 METTL21AP1-201ENST00000438852 635 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 IGHV3-42-201ENST00000520410 361 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AC027369.6-201ENST00000525520 931 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AL138828.2-201ENST00000615812 383 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AL031595.1-201ENST00000623969 4709 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 AL109954.1-202ENST00000564051 2148 ntBASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TRGV1A0A0A0MS02 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 TARDBPP1-201ENST00000442013 1203 ntBASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.28□□□□□ -0.6
TRGV1A0A0A0MS02 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms