Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.24■□□□□ 0.35
PTCH2Q9Y6C5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 CLUHP2-201ENST00000426660 1303 ntBASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 AC079112.1-201ENST00000454972 939 ntBASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 AP002803.1-201ENST00000528836 498 ntBASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 DNM1P30-201ENST00000563586 452 ntBASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTCH2Q9Y6C5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 IGHV3-37-201ENST00000518544 340 ntBASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 RBM8B-201ENST00000555532 525 ntBASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 MIR4649-201ENST00000582839 64 ntBASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 AC009955.4-201ENST00000597192 544 ntBASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 AC138894.2-201ENST00000602838 371 ntBASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 AL132994.2-201ENST00000603120 687 ntBASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 AL136301.1-201ENST00000615830 422 ntBASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 AC022188.1-201ENST00000620960 1664 ntBASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTCH2Q9Y6C5 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTCH2Q9Y6C5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms