Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 GPAA1P2-202ENST00000606848 1787 ntBASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
R3HCC1Q9Y3T6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 AC126335.2-201ENST00000623362 4637 ntBASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 MIR648-201ENST00000385046 94 ntBASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 CNN2P11-201ENST00000429351 262 ntBASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 AC005237.2-201ENST00000434368 219 ntBASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 AL592309.1-201ENST00000443127 649 ntBASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 DGCR9-201ENST00000609630 2415 ntBASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 AL031731.1-201ENST00000642131 2094 ntBASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3HCC1Q9Y3T6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 AP006288.1-201ENST00000446065 395 ntBASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 AC105339.1-204ENST00000636249 355 ntBASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
R3HCC1Q9Y3T6 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms