Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC23.6■■□□□ 1.37
RIMBP3Q9UFD9 WASH3P-207ENST00000560956 1394 ntBASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 HLA-DMA-202ENST00000395303 1007 ntBASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 AC131206.1-201ENST00000538078 1211 ntBASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 COX5A-205ENST00000568517 582 ntTSL 3 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 PRMT1P1-201ENST00000604252 1009 ntBASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 AC005865.2-202ENST00000635814 725 ntBASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 TPT1P6-201ENST00000458298 514 ntBASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 B9D1-206ENST00000461069 923 ntTSL 2 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 AC011431.1-201ENST00000512971 230 ntBASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RIMBP3Q9UFD9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RIMBP3Q9UFD9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RIMBP3Q9UFD9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC23.58■■□□□ 1.37
RIMBP3Q9UFD9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RIMBP3Q9UFD9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
RIMBP3Q9UFD9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC23.58■■□□□ 1.37
RIMBP3Q9UFD9 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RIMBP3Q9UFD9 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC23.58■■□□□ 1.36
RIMBP3Q9UFD9 POLR2LP1-206ENST00000444785 187 ntBASIC23.58■■□□□ 1.36
RIMBP3Q9UFD9 AC008026.2-201ENST00000495438 348 ntBASIC23.58■■□□□ 1.36
RIMBP3Q9UFD9 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
RIMBP3Q9UFD9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC23.58■■□□□ 1.36
RIMBP3Q9UFD9 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC23.58■■□□□ 1.36
RIMBP3Q9UFD9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RIMBP3Q9UFD9 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
RIMBP3Q9UFD9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 AC011477.6-201ENST00000604980 1927 ntBASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 MIR611-201ENST00000384869 67 ntBASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RIMBP3Q9UFD9 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 AL050341.2-201ENST00000567508 1541 ntBASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 AC026412.1-206ENST00000502273 206 ntBASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RIMBP3Q9UFD9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms