Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AC084364.1-201ENST00000551967 1556 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AC099063.4-201ENST00000641099 1602 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AC005229.1-201ENST00000392885 409 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 BAATP1-201ENST00000412284 1225 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AC012441.1-201ENST00000446669 685 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AL355864.2-201ENST00000447420 863 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AC119751.2-201ENST00000504529 210 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AC106760.1-201ENST00000508690 800 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 MIR4259-201ENST00000584466 101 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 MIR6775-201ENST00000617557 69 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 MIR6752-201ENST00000618442 71 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AL138799.1-201ENST00000448213 1675 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 AC134312.5-201ENST00000568031 1313 ntBASIC14.57□□□□□ -0.08
CTSFQ9UBX1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CTSFQ9UBX1 PDIA3P1-201ENST00000471856 1510 ntBASIC14.56□□□□□ -0.08
CTSFQ9UBX1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 BOLA2P3-201ENST00000404566 256 ntBASIC14.56□□□□□ -0.08
CTSFQ9UBX1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.56□□□□□ -0.08
CTSFQ9UBX1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.56□□□□□ -0.08
CTSFQ9UBX1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.55□□□□□ -0.08
CTSFQ9UBX1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSFQ9UBX1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSFQ9UBX1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSFQ9UBX1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.55□□□□□ -0.08
CTSFQ9UBX1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSFQ9UBX1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CTSFQ9UBX1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSFQ9UBX1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms