Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.23□□□□□ -0.13
LRFN1Q9P244 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRFN1Q9P244 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.23□□□□□ -0.13
LRFN1Q9P244 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 MSTO2P-201ENST00000314835 1709 ntBASIC14.22□□□□□ -0.13
LRFN1Q9P244 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 AC119751.2-201ENST00000504529 210 ntBASIC14.22□□□□□ -0.13
LRFN1Q9P244 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.22□□□□□ -0.13
LRFN1Q9P244 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LRFN1Q9P244 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 AL138799.1-201ENST00000448213 1675 ntBASIC14.21□□□□□ -0.13
LRFN1Q9P244 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 ANKRD19P-201ENST00000338192 862 ntBASIC14.21□□□□□ -0.13
LRFN1Q9P244 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 AC007551.1-201ENST00000457394 519 ntBASIC14.21□□□□□ -0.13
LRFN1Q9P244 GAPDHP40-201ENST00000505218 1006 ntBASIC14.21□□□□□ -0.13
LRFN1Q9P244 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LRFN1Q9P244 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.21□□□□□ -0.13
LRFN1Q9P244 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms