Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 KRT8P37-201ENST00000451609 1420 ntBASIC14.2□□□□□ -0.14
CLN6Q9NWW5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 AC041040.2-201ENST00000622926 2899 ntBASIC14.2□□□□□ -0.14
CLN6Q9NWW5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLN6Q9NWW5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 LINC01230-201ENST00000625222 3017 ntBASIC14.19□□□□□ -0.14
CLN6Q9NWW5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AC025580.3-201ENST00000617932 1424 ntBASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AC079776.4-201ENST00000511039 504 ntBASIC14.19□□□□□ -0.14
CLN6Q9NWW5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 IGHV3-22-201ENST00000520721 359 ntBASIC14.19□□□□□ -0.14
CLN6Q9NWW5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLN6Q9NWW5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 BCAR1-209ENST00000546196 1340 ntBASIC14.18□□□□□ -0.14
CLN6Q9NWW5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms