Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TLR9Q9NR96 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
TLR9Q9NR96 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TLR9Q9NR96 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 LINC00554-201ENST00000564841 3011 ntBASIC16.3■□□□□ 0.2
TLR9Q9NR96 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 KRT8P19-201ENST00000551916 1455 ntBASIC16.3■□□□□ 0.2
TLR9Q9NR96 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 KRT8P14-201ENST00000414254 1442 ntBASIC16.3■□□□□ 0.2
TLR9Q9NR96 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 MIR769-201ENST00000390225 118 ntBASIC16.3■□□□□ 0.2
TLR9Q9NR96 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 AC016700.1-201ENST00000429424 312 ntBASIC16.3■□□□□ 0.2
TLR9Q9NR96 SERPINA13P-202ENST00000478994 924 ntBASIC16.3■□□□□ 0.2
TLR9Q9NR96 AC044849.1-201ENST00000519737 1188 ntBASIC16.3■□□□□ 0.2
TLR9Q9NR96 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 CHMP4BP1-201ENST00000556017 588 ntBASIC16.3■□□□□ 0.2
TLR9Q9NR96 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR9Q9NR96 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TLR9Q9NR96 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR9Q9NR96 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR9Q9NR96 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR9Q9NR96 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR9Q9NR96 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR9Q9NR96 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR9Q9NR96 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR9Q9NR96 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR9Q9NR96 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR9Q9NR96 CYP46A4P-201ENST00000414953 267 ntBASIC16.29■□□□□ 0.2
TLR9Q9NR96 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 NKAIN1P1-201ENST00000435754 582 ntBASIC16.29■□□□□ 0.2
TLR9Q9NR96 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.29■□□□□ 0.2
TLR9Q9NR96 RN7SL713P-201ENST00000582127 302 ntBASIC16.29■□□□□ 0.2
TLR9Q9NR96 MIR5572-201ENST00000583188 137 ntBASIC16.29■□□□□ 0.2
TLR9Q9NR96 AC091812.3-201ENST00000621362 345 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms