Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 AC108725.1-201ENST00000495472 409 ntBASIC16.04■□□□□ 0.16
HPS4Q9NQG7 GAPDHP40-201ENST00000505218 1006 ntBASIC16.04■□□□□ 0.16
HPS4Q9NQG7 AP001582.1-201ENST00000525856 295 ntBASIC16.04■□□□□ 0.16
HPS4Q9NQG7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 RHOXF1P1-202ENST00000635473 501 ntBASIC16.04■□□□□ 0.16
HPS4Q9NQG7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 AL365209.1-201ENST00000624418 6473 ntBASIC16.04■□□□□ 0.16
HPS4Q9NQG7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HPS4Q9NQG7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 KRT8P44-201ENST00000441609 1350 ntBASIC16.03■□□□□ 0.16
HPS4Q9NQG7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 MIR4313-201ENST00000580760 101 ntBASIC16.03■□□□□ 0.16
HPS4Q9NQG7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 AC009542.2-202ENST00000619004 1067 ntBASIC16.03■□□□□ 0.16
HPS4Q9NQG7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HPS4Q9NQG7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 YBX1P6-201ENST00000442962 1002 ntBASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AC079316.1-201ENST00000548397 411 ntBASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms