Protein–RNA interactions for Protein: Q9HBH1

PDF, Peptide deformylase, mitochondrial, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDFQ9HBH1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PDFQ9HBH1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDFQ9HBH1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PDFQ9HBH1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.55■□□□□ 0.08
PDFQ9HBH1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PDFQ9HBH1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.55■□□□□ 0.08
PDFQ9HBH1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.55■□□□□ 0.08
PDFQ9HBH1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.55■□□□□ 0.08
PDFQ9HBH1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDFQ9HBH1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PDFQ9HBH1 ZBED1P1-201ENST00000502364 1930 ntBASIC15.55■□□□□ 0.08
PDFQ9HBH1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PDFQ9HBH1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 AC134312.5-201ENST00000568031 1313 ntBASIC15.54■□□□□ 0.08
PDFQ9HBH1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 AGAP7P-201ENST00000582299 2062 ntBASIC15.54■□□□□ 0.08
PDFQ9HBH1 AGAP14-201ENST00000624701 2060 ntBASIC15.54■□□□□ 0.08
PDFQ9HBH1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 AC144831.1-201ENST00000573312 2656 ntBASIC15.54■□□□□ 0.08
PDFQ9HBH1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PDFQ9HBH1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PDFQ9HBH1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 KRT8P35-201ENST00000483942 1338 ntBASIC15.53■□□□□ 0.08
PDFQ9HBH1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 EIF3FP3-201ENST00000434851 1086 ntBASIC15.53■□□□□ 0.08
PDFQ9HBH1 AC106760.1-201ENST00000508690 800 ntBASIC15.53■□□□□ 0.08
PDFQ9HBH1 KRT18P25-201ENST00000508931 1278 ntBASIC15.53■□□□□ 0.08
PDFQ9HBH1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 SLC25A47P1-201ENST00000531577 414 ntBASIC15.53■□□□□ 0.08
PDFQ9HBH1 DUX4L47-201ENST00000566374 394 ntBASIC15.53■□□□□ 0.08
PDFQ9HBH1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 GNRHR2-203ENST00000581100 1187 ntBASIC15.53■□□□□ 0.08
PDFQ9HBH1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 AC233724.13-201ENST00000598383 410 ntBASIC15.53■□□□□ 0.08
PDFQ9HBH1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PDFQ9HBH1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PDFQ9HBH1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms